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Paleontology
The study of the fossil record of past geo- logical periods and of the phylogenetic relationships between ancient and contemporary plant and animal species.
 
Palindrome
See Palindromic sequence.
 
Palindromic sequence
A DNA locus whose 5'-to-3' sequence is identical on each DNA strand. The sequence is the same when one strand is read left to right and the other strand is read right to left. Recognition sites of many restriction enzymes are palindromic. See DNA.
 
pAMP
Ampicillin-resistant plasmid developed for this laboratory course. (See Plasmid.)
 
Parasitism
The closee association of two or more dissimilar organisms where the association is harmful to at least one. See Commensalism, Parasitism, Symbiosis.
 
Pathogen
Organism which can cause disease in another organism.
 
pBR322
A derivation of ColE1, one of the first plasmid vectors widely used. (See Plasmid.)
 
PCR
See Polymerase chain reaction.
 
Pedigree
A diagram mapping the genetic history of a par- ticular family.
 
Persistence
Ability of an organism to remain in a particular setting for a period of time after it is introduced.
 
Pesticide
A substance that kills harmful organisms (for example, an insecticide or fungicide).
 
Phage (particle)
See Bacteriophage.
 
Phenotype
The observable characteristics of an organism, the expression of gene alleles (genotype) as an observable physical or biochemical trait. See Genotype.
 
Pheromone
A hormone-like substance that is secreted into the environment.
 
Phosphatase
An enzyme that hydrolyzes esters of phosphoric acid, removing a phosphate group.
 
Phosphodiester bond
A bond in which a phosphate group joins adjacent carbons through ester linkages. A condensation reaction between adjacent nucleotides results in a phosphodiester bond between 3' and 5' carbons in DNA and RNA.
 
Phospholipid
A class of lipid molecules in which a phos- phate group is linked to glycerol and two fatty acyl groups. A chief component of biological membranes. (See Inositol phospholipid.)
 
Phosphorylation
The addition of a phosphate group to a compound.
 
Physical map
A map showing physical locations on a DNA molecule, such as restriction sites, and sequence-tagged sites. (See Mapping.)
 
Plant Pest Act (PPA)
See U.S. Department of Agriculture.
 
Plant Variety Act (PVA)
See U.S. Department of Agriculture.
 
Plaque
A clear spot on a lawn of bacteria or cultured cells where cells have been Iysed by viral infection.
 
Plasmid (p).
A circular DNA molecule, capable of autonomous replication, which typically carries one or more genes encoding antibiotic resistance proteins. Plasmids can transfer genes between bacteria and are important tools of transformation for genetic engineers. (See Nicked circle, pAMP, Relaxed plasmid, Stringent plasmid, Supercoiled plasmid.)
 
Pleiotrophy
The effect of a particular gene on several different traits.
 
Point mutation
A change in a single base pair of a DNA sequence in a gene. (See Mutation.)
 
Poly(A) polymerase
Catalyzes the addition of adenine residues to the 3' end of pre-mRNAs to form the poly(A) tail. (See Polymerase.)
 
Polyacrylamide gel electr
Electrophoresis through a matrix composed of a synthetic polymer, used to separate proteins, small DNA, or RNA molecules of up to 1000 nucleotides. Used in DNA sequencing. (See Electrophoresis.)
 
Polyclonal antibodies
A mixture of immunoglobulin molecules secreted against a specific antigen, each recognizing a different epitope.
 
Polygenic
Controlled by or associated with more than one gene.
 
Polylinker
A short DNA sequence containing several re- striction enzyme recognition sites that is contained in cloning vectors.
 
Polymer
A molecule composed of repeated subunits.
 
Polymerase (DNA).
Synthesizes a double-stranded DNA molecule using a primer and DNA as a template. (See Poly(A) polymerase, Polymerase chain reaction, RNA polymerase, Taq polymerase.)
 
polymerase chain reaction
A procedure that en- zymatically amplifies a DNA polymerase. (See Polymerase.)
 
Polymorphisms
Variant forms of a particular gene that occur simultaneously in a population.
 
Polynucleotide
A DNA polymer composed of multiple nucleotides. (See Nucleotide.)
 
Polypeptide (protein)
A polymer composed of multiple amino acid units linked by peptide bonds.
 
Polyploid
A multiple of the haploid chromosome number that results from chromosome replication without nuclear division.
 
Polysaccharide
A polymer composed of multiple units of monosaccharide (simple sugar).
 
Polyvalent vaccine
A recombinant organism into which has been cloned antigenic determinants from a number of different disease-causing organisms. (See Vaccine.)
 
Population
A local group of organisms belonging to the same species and capable of interbreeding.
 
PPA
See U.S. Department of Agriculture.
 
Primary cell
A cell or cell line taken directly from a living organism, which is not immortalized.
 
Primer
A short DNA or RNA fragment annealed to single-stranded DNA, from which DNA polymerase extends a new DNA strand to produce a duplex molecule.
 
Prion
See Proteinaceous infectious particle.
 
Probe
A sequence of DNA or RNA, labeled or marked with a radioactive isotope, used to detect the presence of complementary nucleotide sequences. See Nucleotide.
 
Prokaryote
A bacterial cell lacking a true nucleus; its DNA is usually in one long strand. See Eukaryote.
 
Promoter
A region of DNA extending 150-300 bp upstream from the transcription start site that contains binding sites for RNA polymerase and a number of proteins that regulate the rate of transcription of the adjacent gene. (See Constitutive promoter.)
 
Pronucleus
Either of the two haploid gamete nuclei just prior to their fusion in the fertilized ovum.
 
Protease
An enzyme that cleaves peptide bonds that link amino acids in protein molecules.
 
Protein
A polymer of amino acids linked via peptide bonds and which may be composed of two or more polypeptide chains. (See Polypeptide.)
 
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